Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015904636.1_cds_XP_016454777.1_48768
CDS Infomation

[gene=LOC107778959] [db_xref=GeneID:107778959] [protein=probable protein phosphatase 2C 46] [protein_id=XP_016454777.1] [location=join(5886..6210,6749..7116,8301..8537,9073..9330)] [gbkey=CDS]
Sequence

ATGTTATCTGGGTTAATGAACTTGTTAAGGGCTTGTTTTCAGCCAAGGGCAAATCGACAC
GTTCATACAACTGGCTCAGATGCCGGCAGTGGACGTCAAGATGGGCTGCTATGGTATAAG
GATACAGGGCAACATTTTAATGGAGACTTCTCTATGGCTGTAGTTCAAGCTAATAATCTA
TTGGAAGATCAGAGCCAAGTTGAATCCGGGTGCCTCGGCTTGCATGATTCTGGGCCGTAT
GGTACCTTTGTTGGAATTTACGATGGGCACGGTGGCCCTGAGACTTCAAGATTCATCAAT
GATCACCTCTTTCAGCATCTCAAGAGGTTTACATCTGAGCAGCAATCTATGTCTGTGGAG
GTGATCCGGAAGGCATTTCAAGCAACGGAAGATGGTTTCCTCTCTGTTGTGACAAAGCAA
TGGCCTGTGAAACCACAGATTGCTGCTGTTGGATCTTGCTGCCTTGTTGGAGTTATCTGC
AGCGGCACATTATATATTGCCAACCTTGGCGATTCTCGAGCAGTCTTGGGGAGACTTGTC
AAGGCAACTGGAGAGATTCTTTCTGTTCAGCTGTCCGCAGAACACAATGCGAGTATTGAA
TCCGTAAGGCAGGAGATGCAGTCTTTGCATCCAGATGACTCACAAATTGTAGTTTTAAAG
CACAACGTCTGGCGTGTGAAGGGCATTATACAGATTTCAAGATCCATTGGTGATGTGTAC
TTAAAGAAAGCTGAATTCAACAGGGAACCTTTGTATGCTAAGTTTCGTCTCCGTGAACCG
ATTAGAAGGCCCATATTAAGCGCAGATCCTGCTATTTTGGTGCACCCTTTGCAGCCTCAA
GATCAGTTTATTATATTTGCCTCGGATGGTCTCTGGGAACACCTAAGTAACCAAGAAGCT
GTTGACATCGTACAGAATCACCCACGCAATGGGATTGCTAAAAGGTTAGTGAAAACTGCA
TTGCAAGAAGCAGCAAAGAAAAGGGAGATGAGGTACTCAGACTTGAAGAAAATTGATCGT
GGAGTCCGTCGACATTTTCATGATGACATTTCAGTTGTAGTTGTATTCCTTGACTCAGAT
CTCGTGAGCAGGGCTAGTAACTCCGCGAAGGCTCCTAACGTGTCAGTGAAAGGTGGCGGC
ATAACTCTGCCTCGAAACACACTCGCTCCTTTCACCACTCCAACTTAA

Peptide Sequence

PEP ID

XP_016454777.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 46 [Nicotiana tabacum]
Sequence

MLSGLMNLLRACFQPRANRHVHTTGSDAGSGRQDGLLWYKDTGQHFNGDFSMAVVQANNL
LEDQSQVESGCLGLHDSGPYGTFVGIYDGHGGPETSRFINDHLFQHLKRFTSEQQSMSVE
VIRKAFQATEDGFLSVVTKQWPVKPQIAAVGSCCLVGVICSGTLYIANLGDSRAVLGRLV
KATGEILSVQLSAEHNASIESVRQEMQSLHPDDSQIVVLKHNVWRVKGIIQISRSIGDVY
LKKAEFNREPLYAKFRLREPIRRPILSADPAILVHPLQPQDQFIIFASDGLWEHLSNQEA
VDIVQNHPRNGIAKRLVKTALQEAAKKREMRYSDLKKIDRGVRRHFHDDISVVVVFLDSD
LVSRASNSAKAPNVSVKGGGITLPRNTLAPFTTPT

Transcript Sequence

Gene sequence data has not been registered.